MarineMetagenomeDB
Explore and download curated marine metagenomes metadata
About
We developed the MarineMetagenomeDB to facilitate the selection and download of marine metagenomes deposited in public repositories (STA and MG-RAST). MarineMetagenomeDB (Release 1.0) contains standardized metadata of 11,449 marine metagenome samples. The Quick Search, Advanced Search, and Interactive Map tab allow users to select samples of interest. The download tool allows easy download of raw sequence data from public repositories. To better understand how to use the web app, you can check our tutorial videos here.
How would you like to explore the database?
Access the full dataset
Explore all the available filters
Select from the world map
Database Version
Release 1.0 (June 2021) - 11,449 marine metagenomes
You may find a video tutorial for the 'Quick Search' in the following link.
Quick filters
Drag the horizontal scroll bar to view all the columns.
© 2021, MarineMetagenonaDB & HumanMetagenomeB & TerrestrialMetagenomeDB development team.
You may find a video tutorial for the 'Advanced Search' in the following link.
Add advanced filter
Drag the horizontal scroll bar to view all the columns.
© 2021, MarineMetagenonaDB & HumanMetagenomeB & TerrestrialMetagenomeDB development team.
Quick tip: Choose a drawing tool from the toolbar 1 to select 2 and inspect 3 metagenomes.
We suggest reading the content in the "Help" tab prior to using the database.
You may find a video tutorial for the 'Interactive Map' in the following link.
© 2021, MarineMetagenonaDB & HumanMetagenomeDB & TerrestrialMetagenomeDB development team.